Codexis, Inc.

Associate Director, ECO Process Development

Codexis, Inc.

full-time

Posted on:

Location: California • 🇺🇸 United States

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Salary

💰 $175,000 - $197,000 per year

Job Level

Senior

About the role

  • Lead the development of robust, scalable, and cost-effective enzymatic processes for the synthesis and modification of siRNA therapeutics.
  • Direct enzyme selection, engineering, and optimization strategies to improve yield, specificity, and purity of siRNA products.
  • Collaborate with Attribute Sciences to define critical quality attributes (CQAs) and ensure appropriate in-process and release testing.
  • Drive technology transfer from lab-scale to pilot- and GMP-scale manufacturing, including authoring of tech transfer documentation and batch records.
  • Serve as a technical subject matter expert (SME) in regulatory filings (e.g., IND, IMPD, BLA), providing content for CMC sections as needed.
  • Oversee external manufacturing partners (CDMOs), providing technical guidance, reviewing protocols, and supporting troubleshooting activities.
  • Manage and mentor a team of scientists and associates; foster a collaborative, data-driven, and innovation-focused culture.
  • Evaluate and implement emerging technologies, tools, and automation relevant to siRNA and enzyme-based synthesis platforms.
  • Develop project timelines, resource planning, and risk assessments in collaboration with Program Management and other functional leads.

Requirements

  • Ph.D. in Biochemistry, Molecular Biology, Chemical Engineering, Pharmaceutical Sciences, or related field; or M.S. with significant relevant experience.
  • 8+ years of experience in process development for oligonucleotides, preferably with direct expertise in siRNA and enzymatic synthesis (e.g., T7 transcription, ligation, nuclease digestion, etc.).
  • Demonstrated success in scaling up enzymatic processes for clinical or commercial manufacturing.
  • Deep understanding of regulatory expectations for nucleic acid-based therapeutics (CMC, ICH guidelines, etc.).
  • Strong leadership and team management skills; experience mentoring junior scientists and leading cross-functional projects.
  • Excellent written and oral communication skills, including experience with regulatory documentation and presentations to senior leadership.
  • Strong written and verbal communication skills, with the ability to clearly convey scientific finds to cross functional teams.
  • Prior experience working with or within CDMOs (valuable).
  • Knowledge of Quality by Design (QbD), Design of Experiments (DoE), and statistical analysis tools (valuable).
  • Strong background in nucleic acid chemistry, enzymatic synthesis, and process scale-up.
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