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Bioinformaticist
AIS, Inc.Bioinformaticist conducting research on marine species distribution and abundance at SEFSC. Involves molecular techniques, data analysis, and collaboration with NOAA and academic institutions.
Tech Stack
Tools & technologiesPython
About the role
Key responsibilities & impact- Conduct and support research to improve laboratory and data analysis techniques to understand the distribution and abundance of marine and anadromous species at SEFSC MMTD
- Use statistical and computational approaches to assess data and results that influence fisheries management and conservation of marine and anadromous taxa
- Continue development of robust data management planning and execution to meet all requirements of the Public Access to Research Results (PARR) Act
- Collaborate with the program manager to identify research priorities and conduct project management to ensure efficient and accurate data delivery; construct and manage deadlines
- Manage laboratory approaches including assisting with purchasing, inventory management, and training new employees
- Occasionally participate in the collection and analysis of data on anadromous or marine organisms, including fieldwork (generally less than 1 week at sea)
- Establish and nurture effective partnerships with internal and external scientists and resource managers from NOAA offices, Federal and State agencies, academic institutions, and international institutions
- Collaborate with internal and external groups to facilitate information sharing toward common objectives
- Prepare management reports, information products, and presentations for both general and technical audiences
- Participate in publishing research in scientific journals as lead or co-author; assist with development of reports, papers, presentations, and briefs on marine or fisheries-related information
- Attend planning and coordination meetings with MMTD researchers virtually or in person
Requirements
What you’ll need- BS Degree in Marine Science or related field plus five years of relevant experience
- Bioinformatics expertise, including experience with Next-Generation Sequencing (NGS) data analysis (RNA-seq, exome-seq, whole-genome and targeted sequencing, methylation analysis)
- Strong knowledge of R/Bioconductor, Python, and other programming languages used in data science and bioinformatics
- Proficiency in scripting languages (Python, R) and knowledge of software engineering best practices
- Experience with data visualization tools/libraries such as ggplot, heatmaps, or dimension reduction techniques
- Ability to present and publish to peer-reviewed audiences and journals
- Ability to go to sea (generally less than 1 week) and lead a small team
- Working knowledge of marine mammal or marine science research activities
Benefits
Comp & perks- Health and dental insurance
- Vacation
- Sick and holiday benefits
ATS Keywords
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Hard Skills & Tools
BioinformaticsData AnalysisNext-Generation Sequencing (NGS)R ProgrammingPython ProgrammingData VisualizationScripting LanguagesStatistical ApproachesLaboratory ManagementProject Management
Soft Skills
CollaborationCommunicationTeam LeadershipPartnership DevelopmentPresentation Skills